Linear Quartets*

(Not part of higher order structures)

Frequency in different RNA datasets
Sno. Topology Quartet name Geometry XRAY NMR HDRNA NDB
1Linear* GAGU SHT-SST-WSC 1 0 0 0
2Linear* AUAG SHC-WWT-HST 1 0 0 0
3Linear* AGAU WWC-SWT-HWC 18 0 0 0
4Linear* AAAG SSC-WWT-SSC 7 0 1 0
5Linear* AAUG HHT-SSC-WWC 64 1 1 0
6Linear* ACGA SSC-WWC-SHT 3 0 1 0
7Linear* AUUA HWT-WHC-WWC 2 0 0 0
8Linear* AUUU WWC-WSC-WWC 2 0 0 0
9Linear* AAAG SSC-SST-HST 2 0 0 0
10Linear* GCUG WWC-SWC-WSC 5 0 0 0
11Linear* AAGA HHT-WST-SHT 1 0 0 0
12Linear* CACG SHC-SSC-WWC 6 0 0 0
13Linear* AAUA HHT-WST-WWC 0 0 1 0
14Linear* AAUA WWC-HWT-SSC 1 0 0 0
15Linear* CGCG WWC-SSC-WWC 56 3 1 0
16Linear* GCUG WWC-WWC-WWC 1 1 0 0
17Linear* AUAG WWC-SSC-HST 99 2 4 0
18Linear* GAGU SWT-HST-SSC 3 0 0 0
19Linear* AAUA SHT-WWC-SHT 4 0 0 0
20Linear* ACGG SSC-WWC-SST 19 0 1 0
21Linear* AACG HST-WWC-WWC 9 0 0 0
22Linear* AGCC HWC-WWC-SWC 1 0 0 0
23Linear* ACGG SSC-WWC-SSC 1 0 0 0
24Linear* AACG WWC-SSC-WWC 1 0 0 0
25Linear* AAGC SHT-SSC-WWC 1 0 1 0
26Linear* AGUA HST-WSC-WWC 64 1 1 0
27Linear* CAUU WWT-SSC-WWT 225 7 4 0
28Linear* CGAG WWC-SWT-HST 631 27 12 1
29Linear* CUUU SWC-WWC-SWC 1 0 0 0
30Linear* AAUA HSC-SSC-WWC 1 0 0 0
31Linear* AUAU WWC-SSC-WST 3 0 0 0
32Linear* ACGA SSC-WWC-SSC 153 4 6 0
33Linear* CGUG WWC-HWC-WWC 2 0 0 0
34Linear* UAAU WHC-SSC-WWC 0 0 1 0
35Linear* GACG SHT-HSC-WWC 1 0 0 0
36Linear* AAAU SHT-WWT-HWT 0 0 1 0
37Linear* CGCG SSC-WWT-SSC 8 0 0 0
38Linear* AAGU WHT-SST-WWC 67 5 1 0
39Linear* CAUG WWT-HWT-HSC 17 0 1 0
40Linear* CGAG WWC-SSC-WWT 7 2 0 0
41Linear* GAAU SHT-SST-WWC 1 0 0 0
42Linear* CGAU WWC-SWC-HWT 152 5 5 0
43Linear* GCCG WWC-HWC-WWC 82 6 1 0
44Linear* CGUG WWC-WSC-WWC 4 1 0 0
45Linear* AUUA SSC-WWC-SSC 26 1 2 0
46Linear* AUAU WWC-SWC-HHC 0 0 1 0
47Linear* AUAU HWT-SHC-WWT 6 0 0 0
48Linear* AUGU WWC-WHC-WWC 1 0 0 0
49Linear* 5GAA WWC-SSC-HST 2 0 1 0
50Linear* CGCG WWC-HHT-HHT 1 0 0 0
51Linear* AUAU WWC-SWT-HHT 31 1 0 0
52Linear* ACGU WSC-WWC-SWT 1 0 0 0
53Linear* CCGC WSC-WWC-SWC 1 0 0 0
54Linear* ACGU WSC-WWC-SWC 3 0 0 0
55Linear* AUAG WWC-SWT-HST 46 1 3 0
56Linear* AUAU SSC-WWC-HWC 2 0 3 0
57Linear* AUCU WWC-WWC-WWC 0 0 0 1
58Linear* AACG HSC-WWC-WWC 1 0 0 0
59Linear* AAGC SHT-SST-WWC 128 4 7 0
60Linear* GGAU SSC-WWC-WWC 1 0 0 0
61Linear* GAAU WWC-HSC-HWT 1 1 0 0
62Linear* GUGU WWC-WHC-WWC 7 0 0 0
63Linear* CGUU WWC-HWC-SWC 2 0 0 0
64Linear* AAGU WHT-WST-WWC 6 1 0 0
65Linear* AUGC WWC-SST-WWC 148 5 2 0
66Linear* AUAG WWC-HSC-SWC 1 0 0 0
67Linear* AAGC HHT-SWC-WWC 1 0 0 0
68Linear* AAUA WWC-SST-WWC 0 0 1 0
69Linear* GCAU WWC-SWC-HSC 15 0 0 0
70Linear* AUUG WWC-SST-WWC 21 1 2 0
71Linear* UAUU WWC-HWC-HWT 1 0 1 0
72Linear* GCAU WWC-SWT-HWC 1 0 0 0
73Linear* AUAU SSC-WWT-SSC 1 0 0 0
74Linear* GAAU SWT-HWT-SSC 2 0 0 0
75Linear* GAAU SSC-WWT-SSC 2 0 0 0
76Linear* GCAU WWC-SWT-HWT 1 1 0 0
77Linear* GGCU WHC-WWC-WWC 1 0 0 0
78Linear* CGUU WWT-SHC-WWT 1 0 0 0
79Linear* ACGC HSC-WWC-SWC 0 0 1 0
80Linear* GCAU WWC-SST-HWT 34 1 1 0
81Linear* AAGU SHT-SSC-WWC 2 0 0 0
82Linear* ACGU WSC-WWC-SHC 6 0 0 0
83Linear* ACGA SHC-WWC-H+T 1 0 0 0
84Linear* ACGC HSC-+HT-WWC 1 0 0 0
85Linear* GAAG SHT-WHT-WST 119 5 1 0
86Linear* CGAU WWC-SHC-WWT 134 7 1 0
87Linear* UAAU WSC-HHT-WWC 2 1 0 0
88Linear* CGGG WWC-HWC-SST 1 0 0 0
89Linear* CACG WHT-WST-WWC 3 0 0 0
90Linear* CGAU WWC-SHC-WWC 4 0 0 0
91Linear* GAAG SHT-WWT-HST 9 0 0 0
92Linear* AAGC WWC-WWC-WWC 3 0 0 0
93Linear* ACGG HSC-WWC-SWC 4 0 0 0
94Linear* AAUA WSC-WSC-WWC 0 0 1 0
95Linear* AAGC SWC-SST-WWC 1 0 0 0
96Linear* AUAU SSC-WWC-HST 1 0 0 0
97Linear* CAGC SHT-SST-WWC 4 0 0 0
98Linear* AAUG WWT-HWT-HSC 1 0 0 0
99Linear* CGAG WWC-SST-HST 2378 85 48 7
100Linear* GCAU WWC-SWC-HWC 21 1 1 0
101Linear* AUUA HHT-WWC-WWC 2 0 0 0
102Linear* UAGU WWC-HST-SHC 24 1 0 0
103Linear* AGCC HST-WWC-W+C 1 0 1 0
104Linear* GCAU WWC-SWC-HWT 34 7 6 0
105Linear* UAGU WHT-SST-WWC 0 0 1 0
106Linear* GGAU WWT-SWT-HWC 164 7 3 0
107Linear* GAAG H+C-SSC-HST 0 0 1 0
108Linear* GACG SHT-WST-WWC 230 11 3 0
109Linear* GCAU WWC-SWT-HST 1 0 0 0
110Linear* CAGU WHT-WST-WWC 17 0 1 0
111Linear* AUAU WWC-SST-WWC 22 0 1 0
112Linear* AGAU SST-WWC-WWC 1 0 0 0
113Linear* CAAG W+C-SSC-HST 16 0 1 0
114Linear* CAGG WHT-SST-HWC 2 0 0 0
115Linear* UAAU WWC-SWC-WWC 1 1 1 0
116Linear* GACG SHT-SSC-WWC 515 17 11 0
117Linear* AUAU WSC-WWC-SWC 12 1 0 0
118Linear* CCGG WHC-WWC-HWC 1 0 0 0
119Linear* CAGU WHT-SST-WWC 22 1 0 0
120Linear* CGAG WWC-SSC-HST 741 25 18 0
121Linear* AAUA SHT-WWC-SWT 3 0 0 0
122Linear* AGCU SST-WWC-HST 1 0 0 0
123Linear* AAGA SSC-SST-WWC 1 1 0 0
124Linear* AAGC WWT-SSC-WWC 2 1 0 0
125Linear* AAGC HWT-SSC-WWC 1 0 0 0
126Linear* CGGG WWC-SST-HST 0 0 1 0
127Linear* 4AAU WHT-WSC-HWT 1 0 0 0
128Linear* GACG SHT-SST-WWC 93 4 7 0
129Linear* AUAG WWC-SHT-WWT 34 1 2 0
130Linear* UGGU HSC-WST-WWC 5 0 0 0
131Linear* AUAG WWT-SSC-HST 1 0 0 0
132Linear* AUAG SSC-WHT-WST 12 0 0 0
133Linear* AGCU SST-WWC-HSC 1 0 0 0
134Linear* GACG WWT-SSC-WWC 2 0 0 0
135Linear* AGAU WWC-SST-HWC 16 1 2 0
136Linear* CGAU WWC-SWT-SWT 323 9 7 0
137Linear* CGAU WWC-SSC-WSC 29 0 1 0
138Linear* GUAU SHC-WHT-WWT 144 5 3 0
139Linear* GCAU WWC-SSC-HWC 167 6 1 0
140Linear* GAAU SWC-WWT-SSC 1 0 0 0
141Linear* AUAU WWC-SWC-SHC 0 0 0 1
142Linear* CGAU +WC-SST-HWT 2 0 0 0
143Linear* GCAU WWC-SSC-HWT 469 11 12 0
144Linear* CGAG WWC-SST-HWC 29 0 0 0
145Linear* AUAU WWT-SWT-HWT 3 0 0 0
146Linear* GUAU WWC-SST-WWC 8 1 1 0
147Linear* AACG SHC-SSC-WWC 23 0 0 0
148Linear* CGAU WWC-SWT-HWT 419 14 8 0
149Linear* UAGU WHT-WST-WWC 2 2 2 0
150Linear* CGGC WWC-SSC-WWC 28 0 1 0
151Linear* AACG WHT-SSC-WWC 1 0 0 0
152Linear* CGAU WWC-SWT-HWC 195 6 2 0
153Linear* AGCC WST-WWC-SWC 231 5 3 0
154Linear* AAGU SSC-WST-WWC 1 0 0 0
155Linear* AACG HHC-SSC-WWC 12 0 0 0
156Linear* UAGU SHT-WST-WWC 5 1 0 0
157Linear* AAGU SSC-SST-WWC 1 0 0 0
158Linear* AUAG WWC-SSC-WWT 22 0 0 0
159Linear* AACG SHC-WSC-WWC 103 3 1 0
160Linear* AUAU HWC-SWC-HWT 1 0 0 0
161Linear* AUUG WWC-WWC-WWC 6 0 0 0
162Linear* CGAU WWC-SST-HST 343 12 10 2
163Linear* CACG WSC-WSC-WWC 7 0 0 0
164Linear* ACGA HWT-WWC-WWC 1 1 0 0
165Linear* AAGC HHT-SSC-WWC 394 14 7 0
166Linear* UAAU SSC-WWT-SSC 1 0 0 0
167Linear* GCAU WWC-SSC-HST 9 0 0 0
168Linear* AAAU WHT-SST-WWC 16 0 2 0
169Linear* AACG WWT-WWT-WWC 2 0 0 0
170Linear* CGAU WWC-SWT-HHT 2 0 0 0
171Linear* GCAU WWC-SSC-HSC 1 0 0 0
172Linear* ACGG WSC-WWC-SHT 2 0 0 0
173Linear* AUGC WWC-WWC-W+C 1 0 0 0
174Linear* AAAG SHT-SSC-+HC 2 0 1 0
175Linear* AAGC SHT-WST-WWC 9 0 0 0
176Linear* ACGA HST-WWC-WWC 0 0 1 0
177Linear* CGAU WWC-SWT-SSC 1 0 0 0
178Linear* ACGA SHC-WWC-SWT 3 0 0 0
179Linear* GAAU SHT-WHT-WWT 46 1 1 0
180Linear* AGCG SSC-WST-WWC 182 6 2 0
181Linear* ACGG SHC-WWC-SWC 29 1 2 0
182Linear* ACGA WSC-WWC-SSC 3 0 0 0
183Linear* CGAU WWC-SHT-WWT 159 3 2 0
184Linear* GUAU SHC-WHT-WST 2 0 0 0
185Linear* AGAG WSC-SWT-HST 88 2 2 0
186Linear* CAUC HSC-WWC-SWC 37 1 1 0
187Linear* UAGU WHT-SSC-WWC 24 1 0 0
188Linear* AUAG HWT-SSC-HST 2 0 0 0
189Linear* UAAU SSC-WHT-WWC 0 0 1 0
190Linear* AAUA WWT-SSC-WHT 4 0 0 0
191Linear* AAUA WHT-WST-WWC 56 2 2 0
192Linear* CGAU WWC-SWT-HST 132 2 4 0
193Linear* ACGC SSC-WWC-WWC 2 1 0 0
194Linear* CAAU SHT-WSC-HWT 0 0 1 0
195Linear* AAUU HHT-WWT-WWT 5 0 0 0
196Linear* GCGG SSC-WWC-SSC 1 0 0 0
197Linear* CAGC WHT-WST-WWC 224 6 3 0
198Linear* AUAU WWC-WHC-WWC 6 1 0 0
199Linear* UAUU SSC-HWT-HST 1 0 0 0
200Linear* AGCC SWC-WWC-SWC 1 0 0 0
201Linear* GAGU SHT-SSC-WWC 3 0 0 0
202Linear* CAAG SSC-WWT-SSC 43 1 0 0
203Linear* CGAU WWC-SST-HWC 25 1 0 0
204Linear* AAUA WWT-HWT-SSC 101 7 7 0
205Linear* CGAU WWC-SST-HWT 479 15 8 0
206Linear* AUCG HSC-SHC-WWC 3 0 0 2
207Linear* CGOD WWC-SSC-WWC 2 0 0 0
208Linear* GCAU WWC-SST-WWC 57 1 1 0
209Linear* CAUC WSC-WWC-SHC 0 0 1 0
210Linear* AACG SHC-WST-WWC 3 0 0 0
211Linear* GAUG SWC-HHC-HHT 1 0 0 0
212Linear* CAGG WHT-WST-HWC 1 0 0 0
213Linear* AACG HWT-SSC-WWC 1 0 0 0
214Linear* AUAU WWC-SWT-HWC 33 1 2 0
215Linear* AAUG WWT-SSC-WWC 3 0 0 0
216Linear* GCCG HST-WSC-WWC 1 0 0 0
217Linear* CACG WHT-SSC-WWC 156 11 1 0
218Linear* UAAU WHT-SSC-WWC 2 0 0 0
219Linear* AUAU WWC-SWT-HWT 153 6 4 0
220Linear* ACGA SHC-WWC-SST 7 0 0 0
221Linear* CGAU WWC-WHT-WST 1 0 0 0
222Linear* ACCG HWT-+WC-WWC 1 0 0 0
223Linear* AAGC WHT-SSC-WWC 4 0 0 0
224Linear* GGAU WWT-SST-HWC 31 0 0 0
225Linear* AAUG HHT-SST-WWC 2 0 0 0
226Linear* CGGU WWC-SSC-WWC 12 0 0 0
227Linear* AAAA HHT-SWC-SHT 22 0 2 0
228Linear* GAUG SWC-HWC-WHT 2 0 0 0
229Linear* AUUA WWC-SST-WWC 53 1 3 0
230Linear* ACGA WSC-WWC-SWC 1 0 0 0
231Linear* AAUA HSC-WWC-SWC 18 0 1 0
232Linear* GCAU WWC-SWC-HHC 2 0 0 0
233Linear* ACGA WSC-WWC-SWT 4 0 3 6
234Linear* AAAU HHT-SST-WWC 4 0 0 0
235Linear* AAUG SWC-HWC-WWC 67 0 1 0
236Linear* AGAC WWC-SST-HWT 4 0 0 0
237Linear* CGGG WWC-WWT-WWT 2 1 0 0
238Linear* CAAU WSC-WWT-HWT 44 1 1 0
239Linear* GAAG SHT-WHT-SST 55 2 1 0
240Linear* CGCG WWC-WSC-+WC 1 0 0 0
241Linear* GAGU SWC-HST-WWC 15 1 1 0
242Linear* ACGC SSC-WWC-SSC 1 1 0 0
243Linear* AAGC WSC-WST-WWC 1 0 0 0
244Linear* AAUA SSC-WWC-SSC 89 1 5 0
245Linear* UAUU WHT-WWC-SWT 1 0 0 0
246Linear* GGGG HWC-HWC-HWC 0 0 0 1
247Linear* GAAU WWT-SSC-WWC 3 0 0 0
248Linear* GAAG SHT-SSC-WST 1 0 0 0
249Linear* GAAU SHT-SSC-WWC 209 11 5 0
250Linear* AUAG WWC-WWC-WWC 2 0 0 0
251Linear* AAGC HHT-WST-WWC 154 8 3 0
252Linear* AUAU WWT-SHC-WWT 12 0 0 0
253Linear* ACGC WSC-WWC-WSC 1 0 0 0
254Linear* AAGC WHT-WST-WWC 307 26 14 0
255Linear* AAUU SSC-WWC-SST 1 0 0 0
256Linear* AGAU WWC-SHC-WWT 0 0 1 0
257Linear* AUAU WWC-SWC-HWT 2 0 2 0
258Linear* GCUG WWC-SST-WWC 128 5 4 0
259Linear* AAUA WST-HWT-SSC 6 0 1 0
260Linear* UAAU WHT-WWT-HWT 5 0 0 0
261Linear* CGAU WWC-SWT-WSC 1 0 0 0
262Linear* AAUA WHT-WWC-HSC 1 0 0 0
263Linear* UAAU WWC-SSC-WWT 1 0 0 0
264Linear* AUCG WWC-WWC-WWC 8 1 0 0
265Linear* AUAU WWT-SSC-WWC 19 2 0 0
266Linear* AUUG WWC-WSC-WWC 1 0 0 0
267Linear* GCCG WWC-SST-WWC 87 8 0 0
268Linear* UAGU WHT-WSC-WWC 205 11 1 0
269Linear* UAAU WWC-SSC-WWC 5 0 0 0
270Linear* AAUA SSC-WWT-SSC 1 0 0 0
271Linear* GCAU WWC-SSC-WWC 28 1 0 0
272Linear* UAUU SHC-WSC-WWC 0 0 1 0
273Linear* CCGC WHC-WWC-WWC 1 0 0 0
274Linear* CGAU WWC-WWC-WWC 8 0 9 0
275Linear* AGCG SSC-WWC-SSC 11 2 1 0
276Linear* AGUA HST-SHC-WHT 2 1 1 0
277Linear* GUAU WWC-SSC-HWC 65 0 4 0
278Linear* CGAU WWC-SWC-WWC 1 0 0 0
279Linear* ACGG WWT-WWC-SSC 2 0 0 0
280Linear* AACG SHT-SSC-WWC 3 0 0 0
281Linear* CUUG WWC-HWC-WWC 5 0 0 0
282Linear* CGCG WWC-SST-WWC 8 0 0 0
283Linear* GAAU SHT-WWT-HWT 254 9 5 0
284Linear* AACA HHT-SSC-W+C 137 4 2 0
285Linear* CGAU WWC-SSC-HWT 339 8 13 0
286Linear* AAGC WHT-SST-WWC 398 11 10 0
287Linear* AAUA WHT-WWT-SWC 21 1 0 0
288Linear* GACG WWC-SSC-WWC 303 9 6 0
289Linear* CCCG SWC-HSC-WWC 1 0 0 0
290Linear* CGAU WWC-SSC-HWC 0 0 1 0
291Linear* AAUA WSC-WWC-SHC 44 1 2 0
292Linear* AGGC WWC-SST-WWC 2 0 1 0
293Linear* GAGU SHT-WST-WWC 59 2 6 0
294Linear* GCGG WWC-SSC-HST 1 1 0 0
295Linear* AACG WWT-SSC-WWC 15 0 0 0
296Linear* CGOC WWC-SSC-WWC 10 0 0 0
297Linear* AGCG HST-SWC-WWC 1 0 0 0
298Linear* ACGA WST-WWC-SSC 7 0 0 0
299Linear* AUUG WWC-SWT-HSC 51 1 1 0
300Linear* CAAU WSC-WSC-WWC 34 1 3 0
301Linear* AAGC HST-SST-WWC 3 0 0 0
302Linear* CGGU WWC-SST-WWC 17 1 1 0
303Linear* AACG HHT-SSC-WWC 501 10 13 0
304Linear* CAGC WHT-SST-WWC 423 15 9 0
305Linear* AOGC WWC-SSC-WWC 1 0 0 0
306Linear* AUAC WWC-SSC-HWT 62 1 1 0
307Linear* CGAG WWC-SHC-WWT 1 0 0 0
308Linear* CGUG WWC-WWC-WWC 1 0 0 0
309Linear* AUAU WWC-SSC-HWT 124 3 4 0
310Linear* AUAU WST-WWC-HWC 329 10 8 0
311Linear* ACAU +WC-SSC-HWC 0 0 1 0
312Linear* AAGC HHT-WSC-WWC 1 0 0 0
313Linear* GCAU WWC-HSC-WWC 1 0 0 0
314Linear* CGCG WWC-WSC-WWC 1 0 0 0
315Linear* CGAG WWC-WWC-WWC 2 0 0 0
316Linear* GAGU SHT-SST-WWC 81 2 4 0
317Linear* AUAG SSC-WHT-HWT 1 0 0 0
318Linear* GAUG WWC-WWC-SSC 1 0 0 0
319Linear* GCAU WWC-SSC-WSC 245 9 7 0
320Linear* UAUU SWT-HWT-HWC 1 0 0 0
321Linear* AAUA SSC-WWC-SWT 26 1 1 0
322Linear* AAUA HHT-SSC-WWC 243 9 5 0
323Linear* AACG SSC-WSC-WWC 39 0 0 0
324Linear* GUAU SSC-WWC-HWC 325 10 8 0
325Linear* AGCG SSC-WWC-SWT 126 8 3 0
326Linear* GAAG SHT-SSC-WWC 210 12 2 0
327Linear* AAUC WWT-HWT-SWC 1 0 0 0
328Linear* AAGA WWT-WWC-WHC 1 1 0 0
329Linear* AUAC WWC-SWT-WSC 1 0 0 0
330Linear* ACGA WSC-WWC-SHT 1 0 0 0
331Linear* CGCG +WC-WWC-+WC 1 0 0 0
332Linear* ACGA WSC-WWC-SHC 1 0 0 0
333Linear* AAAU HHT-SSC-WWC 65 1 2 0
334Linear* CGAG WWC-SWT-HWC 21 1 1 0
335Linear* CGUG WWT-SHC-WWC 10 0 0 0
336Linear* CAAU WSC-WWT-SSC 5 0 0 0
337Linear* GCGU WWC-SWT-WWT 16 0 0 0
338Linear* UAGU HWC-HST-SHC 3 0 0 0
339Linear* ACGA SSC-WWC-SWT 4 0 0 0
340Linear* AAUU HSC-HWT-HWC 1 0 0 0
341Linear* GCAU WWC-SSC-HHC 1 0 0 0
342Linear* ACGA SSC-WWC-SWC 4 0 0 0
343Linear* UAAU WHT-SHC-WWT 2 0 0 0
344Linear* AUAC SWT-WHC-WWT 1 0 0 0
345Linear* AUAC HSC-WWC-SWC 4 0 0 0
346Linear* AGCU WST-WWC-SWC 1 0 0 0
347Linear* AAGC SHC-WSC-WWC 18 0 0 0
348Linear* GCUU WWC-SWC-HHT 1 0 0 0
349Linear* CGAG WWC-SSC-WST 1 0 0 0
350Linear* AAGC SHC-SSC-WWC 2 0 0 0
351Linear* AUAU HWT-SWC-HWT 8 1 0 0
352Linear* CGCG WWC-SWT-+HC 0 0 1 0
353Linear* AUAU HWC-SHC-WWT 1 0 0 0
354Linear* UUUU HWC-HWC-HWC 3 0 2 0
355Linear* AAGC HHT-SST-WWC 325 6 9 0